The relationship between the partial pressure of carbon dioxide (pCO2) and dissolved organic carbon (DOC) concentration in Brazilian lakes, encompassing 225 samples across a wide latitudinal range in the tropics, was tested. Unlike the positive relationship reported for lake waters, which was largely based on temperate lakes, we found no significant relationship for low-latitude lakes (< 33°), despite very broad ranges in both pCO2 and DOC levels. These results suggest substantial differences in the carbon cycling of low-latitude lakes, which must be considered when upscaling limnetic carbon cycling to global scales.